WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04G6.1b Sequence Name  C04G6.1b
Length (nt)  1281   Chromosome Location  II: 5104464-5104562
Chromosome . Primary Identifier  II Chromosome Location . Start  5104464
Chromosome Location . End  5104562
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G6.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32111 MPK-2, isoform b 48.5 426 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00113186
WBRNAi00039667
WBRNAi00010153
WBRNAi00076078
WBRNAi00028462
WBRNAi00112956
WBRNAi00113100
WBRNAi00113154
WBRNAi00087945

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04G6.1b 5104464 5104562 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003402 mpk-2 C04G6.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04G6.1b 5104464 5104562 1
CDS:C04G6.1b 5104640 5104771 1
CDS:C04G6.1b 5104828 5105109 1
CDS:C04G6.1b 5105411 5105569 1
CDS:C04G6.1b 5105617 5105684 1
CDS:C04G6.1b 5106095 5106347 1
CDS:C04G6.1b 5106397 5106503 1
CDS:C04G6.1b 5106812 5106992 1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04G6.1b.1 C04G6.1b.1 1367   II: 5104441-5107055