WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F09C12.1b Sequence Name  F09C12.1b
Length (nt)  1317   Chromosome Location  II: 5130384-5130506
Chromosome . Primary Identifier  II Chromosome Location . Start  5130384
Chromosome Location . End  5130506
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09C12.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54319 LGC-56, isoform b 50.7 438 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00044084
WBRNAi00030690

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F09C12.1b 5130384 5130506 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001588 lgc-56 F09C12.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F09C12.1b 5130384 5130506 1
CDS:F09C12.1b 5130612 5130689 1
CDS:F09C12.1b 5130938 5131026 1
CDS:F09C12.1b 5131072 5131217 1
CDS:F09C12.1b 5131266 5131542 1
CDS:F09C12.1b 5131879 5132077 1
CDS:F09C12.1b 5132122 5132276 1
CDS:F09C12.1b 5132348 5132428 1
CDS:F09C12.1b 5132920 5133047 1
CDS:F09C12.1b 5133175 5133215 1

1 Sequence

Length
1317

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09C12.1b.1 F09C12.1b.1 1574   II: 5130381-5133469