WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A6.2.2 Sequence Name  F58A6.2.2
Length (nt)  767   Chromosome Location  II: 5136858-5138568
Chromosome . Primary Identifier  II Chromosome Location . Start  5136858
Chromosome Location . End  5138568 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A6.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019023 F58A6.2 F58A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A6.2 F58A6.2 600   II: 5136873-5137041

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.2.2 5136858 5138568 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49378   184   II: 5136858-5137041 Caenorhabditis elegans
Exon49381   80   II: 5137416-5137495 Caenorhabditis elegans
Exon49383   102   II: 5137548-5137649 Caenorhabditis elegans
Exon49385   156   II: 5137697-5137852 Caenorhabditis elegans
Exon49387   63   II: 5138239-5138301 Caenorhabditis elegans
Exon49389   182   II: 5138387-5138568 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.2.2 5136858 5138568 1

1 Sequence

Length
767

1 Sequence Ontology Term

Identifier Name Description
transcript