WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A6.1.1 Sequence Name  F58A6.1.1
Length (nt)  917   Chromosome Location  II: 5142919-5144021
Chromosome . Primary Identifier  II Chromosome Location . Start  5142919
Chromosome Location . End  5144021 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019022 F58A6.1 F58A6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A6.1 F58A6.1 837   II: 5142928-5143046

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.1.1 5142919 5144021 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49412   128   II: 5142919-5143046 Caenorhabditis elegans
Exon49413   104   II: 5143095-5143198 Caenorhabditis elegans
Exon49414   354   II: 5143245-5143598 Caenorhabditis elegans
Exon49415   161   II: 5143648-5143808 Caenorhabditis elegans
Exon49416   170   II: 5143852-5144021 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A6.1.1 5142919 5144021 1

1 Sequence

Length
917

1 Sequence Ontology Term

Identifier Name Description
transcript