WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27D6.4a.1 Sequence Name  C27D6.4a.1
Length (nt)  1340   Chromosome Location  II: 5179030-5181089
Chromosome . Primary Identifier  II Chromosome Location . Start  5179030
Chromosome Location . End  5181089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27D6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016162 crh-2 C27D6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27D6.4a C27D6.4a 675   II: 5179678-5179757

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27D6.4a.1 5179030 5181089 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49487   728   II: 5179030-5179757 Caenorhabditis elegans
Exon49489   97   II: 5179812-5179908 Caenorhabditis elegans
Exon49493   147   II: 5180308-5180454 Caenorhabditis elegans
Exon49497   92   II: 5180528-5180619 Caenorhabditis elegans
Exon49501   276   II: 5180814-5181089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27D6.4a.1 5179030 5181089 -1

1 Sequence

Length
1340

1 Sequence Ontology Term

Identifier Name Description
transcript