WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F11.3d.1 Sequence Name  C34F11.3d.1
Length (nt)  2847   Chromosome Location  II: 5203695-5209666
Chromosome . Primary Identifier  II Chromosome Location . Start  5203695
Chromosome Location . End  5209666 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F11.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016415 ampd-1 C34F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F11.3d C34F11.3d 2847   II: 5203695-5203727

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F11.3d.1 5203695 5209666 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49539   33   II: 5203695-5203727 Caenorhabditis elegans
Exon49540   108   II: 5203871-5203978 Caenorhabditis elegans
Exon49541   236   II: 5204026-5204261 Caenorhabditis elegans
Exon49542   132   II: 5204311-5204442 Caenorhabditis elegans
Exon49543   77   II: 5204487-5204563 Caenorhabditis elegans
Exon49548   53   II: 5204788-5204840 Caenorhabditis elegans
Exon49552   104   II: 5204888-5204991 Caenorhabditis elegans
Exon49558   123   II: 5206578-5206700 Caenorhabditis elegans
Exon49562   230   II: 5206755-5206984 Caenorhabditis elegans
Exon49564   42   II: 5207313-5207354 Caenorhabditis elegans
Exon49568   110   II: 5207667-5207776 Caenorhabditis elegans
Exon49572   119   II: 5207825-5207943 Caenorhabditis elegans
Exon49576   621   II: 5207990-5208610 Caenorhabditis elegans
Exon49580   178   II: 5208660-5208837 Caenorhabditis elegans
Exon49584   519   II: 5208929-5209447 Caenorhabditis elegans
Exon49586   162   II: 5209505-5209666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F11.3d.1 5203695 5209666 1

1 Sequence

Length
2847

1 Sequence Ontology Term

Identifier Name Description
transcript