WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F11.9e.1 Sequence Name  C34F11.9e.1
Length (nt)  2946   Chromosome Location  II: 5214523-5220674
Chromosome . Primary Identifier  II Chromosome Location . Start  5214523
Chromosome Location . End  5220674 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F11.9e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001101 dsh-1 C34F11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F11.9e C34F11.9e 2946   II: 5214523-5214649

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F11.9e.1 5214523 5220674 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49604   127   II: 5214523-5214649 Caenorhabditis elegans
Exon49608   113   II: 5214932-5215044 Caenorhabditis elegans
Exon49616   167   II: 5215665-5215831 Caenorhabditis elegans
Exon49623   168   II: 5216124-5216291 Caenorhabditis elegans
Exon49631   237   II: 5216340-5216576 Caenorhabditis elegans
Exon49639   176   II: 5217015-5217190 Caenorhabditis elegans
Exon49647   241   II: 5217245-5217485 Caenorhabditis elegans
Exon49655   122   II: 5217533-5217654 Caenorhabditis elegans
Exon49664   76   II: 5218966-5219041 Caenorhabditis elegans
Exon49666   1519   II: 5219156-5220674 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F11.9e.1 5214523 5220674 -1

1 Sequence

Length
2946

1 Sequence Ontology Term

Identifier Name Description
transcript