WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54A12.2b Sequence Name  C54A12.2b
Length (nt)  1089   Chromosome Location  II: 5251121-5251241
Chromosome . Primary Identifier  II Chromosome Location . Start  5251121
Chromosome Location . End  5251241
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54A12.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51503 FRPR-4, isoform b 42.8 362 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043107
WBRNAi00012370

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54A12.2b 5251121 5251241 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016909 frpr-4 C54A12.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54A12.2b 5251121 5251241 -1
CDS:C54A12.2b 5253264 5253320 -1
CDS:C54A12.2b 5253436 5253560 -1
CDS:C54A12.2b 5253606 5254034 -1
CDS:C54A12.2b 5254309 5254450 -1
CDS:C54A12.2b 5254701 5254792 -1
CDS:C54A12.2b 5255407 5255529 -1

1 Sequence

Length
1089

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54A12.2b.1 C54A12.2b.1 1290   II: 5250920-5255529