WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK622.3d.1 Sequence Name  ZK622.3d.1
Length (nt)  1645   Chromosome Location  II: 5278171-5280279
Chromosome . Primary Identifier  II Chromosome Location . Start  5278171
Chromosome Location . End  5280279 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK622.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022781 pmt-1 ZK622.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK622.3d ZK622.3d 1383   II: 5278429-5278986

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK622.3d.1 5278171 5280279 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49766   816   II: 5278171-5278986 Caenorhabditis elegans
Exon49775   264   II: 5279306-5279569 Caenorhabditis elegans
Exon49783   376   II: 5279615-5279990 Caenorhabditis elegans
Exon49793   189   II: 5280091-5280279 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK622.3d.1 5278171 5280279 -1

1 Sequence

Length
1645

1 Sequence Ontology Term

Identifier Name Description
transcript