WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:ZK622.3c Sequence Name  ZK622.3c
Length (nt)  1436   Chromosome Location  II: 5278429-5282509
Chromosome . Primary Identifier  II Chromosome Location . Start  5278429
Chromosome Location . End  5282509 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK622.3c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022781 pmt-1 ZK622.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK622.3c 5278429 5282509 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49768   558   II: 5278429-5278986 Caenorhabditis elegans
Exon49779   264   II: 5279306-5279569 Caenorhabditis elegans
Exon49787   384   II: 5279615-5279998 Caenorhabditis elegans
Exon49795   189   II: 5280091-5280279 Caenorhabditis elegans
Exon49797   41   II: 5282469-5282509 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK622.3c 5278429 5282509 -1

1 Sequence

Length
1436

1 Sequence Ontology Term

Identifier Name Description
transcript