WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F08B1.2b Sequence Name  F08B1.2b
Length (nt)  5372   Chromosome Location  II: 5312120-5319083
Chromosome . Primary Identifier  II Chromosome Location . Start  5312120
Chromosome Location . End  5319083 Method  non_coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B1.2b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001538 gcy-12 F08B1.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08B1.2b 5312120 5319083 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49844   219   II: 5312120-5312338 Caenorhabditis elegans
Exon49846   313   II: 5312390-5312702 Caenorhabditis elegans
Exon49848   151   II: 5313113-5313263 Caenorhabditis elegans
Exon49850   308   II: 5313330-5313637 Caenorhabditis elegans
Exon49852   156   II: 5313683-5313838 Caenorhabditis elegans
Exon49854   194   II: 5313887-5314080 Caenorhabditis elegans
Exon49856   154   II: 5314125-5314278 Caenorhabditis elegans
Exon49858   361   II: 5314701-5315061 Caenorhabditis elegans
Exon49860   1726   II: 5315108-5316833 Caenorhabditis elegans
Exon49862   133   II: 5316879-5317011 Caenorhabditis elegans
Exon49863   579   II: 5317137-5317715 Caenorhabditis elegans
Exon49866   345   II: 5317770-5318114 Caenorhabditis elegans
Exon49868   202   II: 5318189-5318390 Caenorhabditis elegans
Exon49870   206   II: 5318444-5318649 Caenorhabditis elegans
Exon49872   197   II: 5318706-5318902 Caenorhabditis elegans
Exon49873   128   II: 5318956-5319083 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08B1.2b 5312120 5319083 1

1 Sequence

Length
5372

1 Sequence Ontology Term

Identifier Name Description
transcript