WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F08B1.1c Sequence Name  F08B1.1c
Length (nt)  1577   Chromosome Location  II: 5338228-5340247
Chromosome . Primary Identifier  II Chromosome Location . Start  5338228
Chromosome Location . End  5340247 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08B1.1c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006923 vhp-1 F08B1.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08B1.1c 5338228 5340247 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49890   129   II: 5338228-5338356 Caenorhabditis elegans
Exon49897   275   II: 5338740-5339014 Caenorhabditis elegans
Exon49906   1173   II: 5339075-5340247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08B1.1c 5338228 5340247 1

1 Sequence

Length
1577

1 Sequence Ontology Term

Identifier Name Description
transcript