WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E5.7.1 Sequence Name  F09E5.7.1
Length (nt)  1438   Chromosome Location  II: 5352099-5353709
Chromosome . Primary Identifier  II Chromosome Location . Start  5352099
Chromosome Location . End  5353709 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017285 F09E5.7 F09E5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E5.7 F09E5.7 936   II: 5352109-5352174

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.7.1 5352099 5353709 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49939   76   II: 5352099-5352174 Caenorhabditis elegans
Exon49940   163   II: 5352222-5352384 Caenorhabditis elegans
Exon49941   484   II: 5352430-5352913 Caenorhabditis elegans
Exon49942   715   II: 5352995-5353709 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.7.1 5352099 5353709 1

1 Sequence

Length
1438

1 Sequence Ontology Term

Identifier Name Description
transcript