WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E5.11.1 Sequence Name  F09E5.11.1
Length (nt)  789   Chromosome Location  II: 5357308-5358187
Chromosome . Primary Identifier  II Chromosome Location . Start  5357308
Chromosome Location . End  5358187 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017289 F09E5.11 F09E5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E5.11 F09E5.11 657   II: 5357434-5357736

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.11.1 5357308 5358187 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49950   429   II: 5357308-5357736 Caenorhabditis elegans
Exon49951   201   II: 5357783-5357983 Caenorhabditis elegans
Exon49952   159   II: 5358029-5358187 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.11.1 5357308 5358187 -1

1 Sequence

Length
789

1 Sequence Ontology Term

Identifier Name Description
transcript