WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E5.16.1 Sequence Name  F09E5.16.1
Length (nt)  952   Chromosome Location  II: 5364469-5365745
Chromosome . Primary Identifier  II Chromosome Location . Start  5364469
Chromosome Location . End  5365745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017292 F09E5.16 F09E5.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E5.16 F09E5.16 303   II: 5365061-5365146

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.16.1 5364469 5365745 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49976   678   II: 5364469-5365146 Caenorhabditis elegans
Exon49977   142   II: 5365290-5365431 Caenorhabditis elegans
Exon49978   132   II: 5365614-5365745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.16.1 5364469 5365745 -1

1 Sequence

Length
952

1 Sequence Ontology Term

Identifier Name Description
transcript