WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E5.15b.1 Sequence Name  F09E5.15b.1
Length (nt)  600   Chromosome Location  II: 5378195-5379493
Chromosome . Primary Identifier  II Chromosome Location . Start  5378195
Chromosome Location . End  5379493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.15b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006434 prdx-2 F09E5.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E5.15b F09E5.15b 600   II: 5378195-5378206

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.15b.1 5378195 5379493 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50015   12   II: 5378195-5378206 Caenorhabditis elegans
Exon50017   376   II: 5378842-5379217 Caenorhabditis elegans
Exon50020   212   II: 5379282-5379493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E5.15b.1 5378195 5379493 1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript