WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F09E5.1 Sequence Name  F09E5.1
Length (nt)  1794   Chromosome Location  II: 5380028-5380093
Chromosome . Primary Identifier  II Chromosome Location . Start  5380028
Chromosome Location . End  5380093
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E5.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02604 PKC-3 68.0 597 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00108247
WBRNAi00084140
WBRNAi00008617
WBRNAi00007258
WBRNAi00091300
WBRNAi00027729
WBRNAi00080728
WBRNAi00071852
WBRNAi00044118
WBRNAi00071136
WBRNAi00087585
WBRNAi00087584
WBRNAi00108279
WBRNAi00091971
WBRNAi00025041
WBRNAi00114524
WBRNAi00077105
WBRNAi00091970
WBRNAi00091968
WBRNAi00091969
WBRNAi00084156
WBRNAi00084141
WBRNAi00063497
WBRNAi00111720
WBRNAi00110826

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F09E5.1 5380028 5380093 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004034 pkc-3 F09E5.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F09E5.1 5380028 5380093 1
CDS:F09E5.1 5380501 5380759 1
CDS:F09E5.1 5381037 5381121 1
CDS:F09E5.1 5381171 5381297 1
CDS:F09E5.1 5381460 5381636 1
CDS:F09E5.1 5382308 5382559 1
CDS:F09E5.1 5382644 5383002 1
CDS:F09E5.1 5383049 5383391 1
CDS:F09E5.1 5383507 5383632 1

1 Sequence

Length
1794

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09E5.1.1 F09E5.1.1 2332   II: 5380027-5384169