WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07F6.8.1 Sequence Name  F07F6.8.1
Length (nt)  1068   Chromosome Location  II: 5424141-5425733
Chromosome . Primary Identifier  II Chromosome Location . Start  5424141
Chromosome Location . End  5425733 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07F6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017220 F07F6.8 F07F6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07F6.8 F07F6.8 957   II: 5424237-5424467

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.8.1 5424141 5425733 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50145   327   II: 5424141-5424467 Caenorhabditis elegans
Exon50146   96   II: 5424516-5424611 Caenorhabditis elegans
Exon50147   420   II: 5424659-5425078 Caenorhabditis elegans
Exon50148   120   II: 5425136-5425255 Caenorhabditis elegans
Exon50149   105   II: 5425629-5425733 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.8.1 5424141 5425733 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript