WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07F6.4.1 Sequence Name  F07F6.4.1
Length (nt)  1595   Chromosome Location  II: 5427449-5429572
Chromosome . Primary Identifier  II Chromosome Location . Start  5427449
Chromosome Location . End  5429572 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07F6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017217 F07F6.4 F07F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07F6.4 F07F6.4 1590   II: 5427449-5427481

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.4.1 5427449 5429572 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50150   33   II: 5427449-5427481 Caenorhabditis elegans
Exon50151   102   II: 5427574-5427675 Caenorhabditis elegans
Exon50152   99   II: 5427727-5427825 Caenorhabditis elegans
Exon50153   166   II: 5427882-5428047 Caenorhabditis elegans
Exon50154   311   II: 5428103-5428413 Caenorhabditis elegans
Exon50155   435   II: 5428463-5428897 Caenorhabditis elegans
Exon50156   174   II: 5428943-5429116 Caenorhabditis elegans
Exon50157   140   II: 5429167-5429306 Caenorhabditis elegans
Exon50158   52   II: 5429352-5429403 Caenorhabditis elegans
Exon50159   83   II: 5429490-5429572 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.4.1 5427449 5429572 -1

1 Sequence

Length
1595

1 Sequence Ontology Term

Identifier Name Description
transcript