WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07F6.2.1 Sequence Name  F07F6.2.1
Length (nt)  974   Chromosome Location  II: 5430207-5431470
Chromosome . Primary Identifier  II Chromosome Location . Start  5430207
Chromosome Location . End  5431470 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07F6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017216 F07F6.2 F07F6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07F6.2 F07F6.2 780   II: 5430353-5430376

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.2.1 5430207 5431470 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50160   170   II: 5430207-5430376 Caenorhabditis elegans
Exon50161   68   II: 5430422-5430489 Caenorhabditis elegans
Exon50162   112   II: 5430541-5430652 Caenorhabditis elegans
Exon50163   139   II: 5430701-5430839 Caenorhabditis elegans
Exon50164   106   II: 5430938-5431043 Caenorhabditis elegans
Exon50165   379   II: 5431092-5431470 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.2.1 5430207 5431470 1

1 Sequence

Length
974

1 Sequence Ontology Term

Identifier Name Description
transcript