WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07F6.5.1 Sequence Name  F07F6.5.1
Length (nt)  739   Chromosome Location  II: 5435724-5436933
Chromosome . Primary Identifier  II Chromosome Location . Start  5435724
Chromosome Location . End  5436933 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07F6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017218 dct-5 F07F6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07F6.5 F07F6.5 624   II: 5435839-5435906

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.5.1 5435724 5436933 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50174   183   II: 5435724-5435906 Caenorhabditis elegans
Exon50175   204   II: 5435954-5436157 Caenorhabditis elegans
Exon50176   110   II: 5436257-5436366 Caenorhabditis elegans
Exon50177   64   II: 5436648-5436711 Caenorhabditis elegans
Exon50178   178   II: 5436756-5436933 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.5.1 5435724 5436933 -1

1 Sequence

Length
739

1 Sequence Ontology Term

Identifier Name Description
transcript