WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07F6.1.1 Sequence Name  F07F6.1.1
Length (nt)  1509   Chromosome Location  II: 5437886-5440256
Chromosome . Primary Identifier  II Chromosome Location . Start  5437886
Chromosome Location . End  5440256 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07F6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017215 F07F6.1 F07F6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07F6.1 F07F6.1 1287   II: 5437903-5437956

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.1.1 5437886 5440256 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50179   71   II: 5437886-5437956 Caenorhabditis elegans
Exon50180   444   II: 5438003-5438446 Caenorhabditis elegans
Exon50181   90   II: 5438775-5438864 Caenorhabditis elegans
Exon50182   307   II: 5438910-5439216 Caenorhabditis elegans
Exon50183   122   II: 5439261-5439382 Caenorhabditis elegans
Exon50184   174   II: 5439735-5439908 Caenorhabditis elegans
Exon50186   301   II: 5439956-5440256 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07F6.1.1 5437886 5440256 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
transcript