WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D1.5.1 Sequence Name  F56D1.5.1
Length (nt)  1329   Chromosome Location  II: 5453847-5455977
Chromosome . Primary Identifier  II Chromosome Location . Start  5453847
Chromosome Location . End  5455977 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000969 dhs-5 F56D1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D1.5 F56D1.5 1137   II: 5453847-5454025

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D1.5.1 5453847 5455977 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50213   179   II: 5453847-5454025 Caenorhabditis elegans
Exon50214   221   II: 5454331-5454551 Caenorhabditis elegans
Exon50215   108   II: 5454601-5454708 Caenorhabditis elegans
Exon50216   323   II: 5455103-5455425 Caenorhabditis elegans
Exon50217   498   II: 5455480-5455977 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D1.5.1 5453847 5455977 1

1 Sequence

Length
1329

1 Sequence Ontology Term

Identifier Name Description
transcript