WormMine: Gene WBGene00219980

• WormBase Gene ID: WBGene00219980
• Gene Name: F56D1.17
• Sequence Name: F56D1.17
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 52

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00219980

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F56D1.17	F56D1.17	52	II: 5469257-5469308

Other

0 CDSs

3 RNAi Result

• WBRNAi00000302
• WBRNAi00027776
• WBRNAi00112028

5 Allele

• gk963801
• gk963053
• gk963877
• gk963878
• gk5386

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00219980
• Start: 5469257
• End: 5469308
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00219980
• Start: 5469257
• End: 5469308
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 52

1 Sequence Ontology Term