WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK177.5.1 Sequence Name  ZK177.5.1
Length (nt)  1551   Chromosome Location  II: 5504044-5505975
Chromosome . Primary Identifier  II Chromosome Location . Start  5504044
Chromosome Location . End  5505975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK177.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000375 cyp-44A1 ZK177.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK177.5 ZK177.5 1470   II: 5504047-5504209

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK177.5.1 5504044 5505975 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50413   166   II: 5504044-5504209 Caenorhabditis elegans
Exon50414   120   II: 5504270-5504389 Caenorhabditis elegans
Exon50415   115   II: 5504435-5504549 Caenorhabditis elegans
Exon50416   72   II: 5504597-5504668 Caenorhabditis elegans
Exon50417   225   II: 5504712-5504936 Caenorhabditis elegans
Exon50418   144   II: 5504981-5505124 Caenorhabditis elegans
Exon50419   103   II: 5505175-5505277 Caenorhabditis elegans
Exon50420   254   II: 5505325-5505578 Caenorhabditis elegans
Exon50421   352   II: 5505624-5505975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK177.5.1 5504044 5505975 1

1 Sequence

Length
1551

1 Sequence Ontology Term

Identifier Name Description
transcript