WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C17C3.12c Sequence Name  C17C3.12c
Length (nt)  1161   Chromosome Location  II: 5545032-5545214
Chromosome . Primary Identifier  II Chromosome Location . Start  5545032
Chromosome Location . End  5545214
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17C3.12c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03983 ACDH-2, isoform c 42.8 386 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040775
WBRNAi00040776
WBRNAi00028991
WBRNAi00103784

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C17C3.12c 5545032 5545214 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015894 acdh-2 C17C3.12 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C17C3.12c 5545032 5545214 -1
CDS:C17C3.12c 5545266 5545403 -1
CDS:C17C3.12c 5545807 5545865 -1
CDS:C17C3.12c 5546430 5546526 -1
CDS:C17C3.12c 5546573 5546809 -1
CDS:C17C3.12c 5546990 5547297 -1
CDS:C17C3.12c 5547351 5547489 -1

1 Sequence

Length
1161

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C17C3.12c.1 C17C3.12c.1 1415   II: 5544781-5547492