WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17C3.1e.1 Sequence Name  C17C3.1e.1
Length (nt)  1178   Chromosome Location  II: 5572705-5574844
Chromosome . Primary Identifier  II Chromosome Location . Start  5572705
Chromosome Location . End  5574844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17C3.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015887 C17C3.1 C17C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17C3.1e C17C3.1e 981   II: 5572705-5572808

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17C3.1e.1 5572705 5574844 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50705   104   II: 5572705-5572808 Caenorhabditis elegans
Exon50708   146   II: 5572856-5573001 Caenorhabditis elegans
Exon50711   439   II: 5573382-5573820 Caenorhabditis elegans
Exon50712   489   II: 5574356-5574844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17C3.1e.1 5572705 5574844 1

1 Sequence

Length
1178

1 Sequence Ontology Term

Identifier Name Description
transcript