WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G10.9c.1 Sequence Name  C17G10.9c.1
Length (nt)  1479   Chromosome Location  II: 5619923-5621735
Chromosome . Primary Identifier  II Chromosome Location . Start  5619923
Chromosome Location . End  5621735 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G10.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015920 eif-3.L C17G10.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G10.9c C17G10.9c 1479   II: 5619923-5620135

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G10.9c.1 5619923 5621735 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50851   213   II: 5619923-5620135 Caenorhabditis elegans
Exon50856   238   II: 5620192-5620429 Caenorhabditis elegans
Exon50861   170   II: 5620479-5620648 Caenorhabditis elegans
Exon50866   345   II: 5620734-5621078 Caenorhabditis elegans
Exon50871   168   II: 5621131-5621298 Caenorhabditis elegans
Exon50876   274   II: 5621342-5621615 Caenorhabditis elegans
Exon50879   71   II: 5621665-5621735 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G10.9c.1 5619923 5621735 -1

1 Sequence

Length
1479

1 Sequence Ontology Term

Identifier Name Description
transcript