WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59E12.6a.1 Sequence Name  F59E12.6a.1
Length (nt)  2243   Chromosome Location  II: 5626815-5630951
Chromosome . Primary Identifier  II Chromosome Location . Start  5626815
Chromosome Location . End  5630951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59E12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019122 F59E12.6 F59E12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59E12.6a F59E12.6a 1500   II: 5627244-5627695

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59E12.6a.1 5626815 5630951 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon50905   881   II: 5626815-5627695 Caenorhabditis elegans
Exon50907   565   II: 5628185-5628749 Caenorhabditis elegans
Exon50911   387   II: 5628821-5629207 Caenorhabditis elegans
Exon50915   99   II: 5629349-5629447 Caenorhabditis elegans
Exon50917   103   II: 5629975-5630077 Caenorhabditis elegans
Exon50921   127   II: 5630127-5630253 Caenorhabditis elegans
Exon50930   81   II: 5630871-5630951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59E12.6a.1 5626815 5630951 -1

1 Sequence

Length
2243

1 Sequence Ontology Term

Identifier Name Description
transcript