WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25H3.10b.1 Sequence Name  C25H3.10b.1
Length (nt)  947   Chromosome Location  II: 5696618-5698941
Chromosome . Primary Identifier  II Chromosome Location . Start  5696618
Chromosome Location . End  5698941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25H3.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016119 C25H3.10 C25H3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25H3.10b C25H3.10b 423   II: 5697213-5697221

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25H3.10b.1 5696618 5698941 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51179   322   II: 5696618-5696939 Caenorhabditis elegans
Exon51181   144   II: 5696989-5697132 Caenorhabditis elegans
Exon51182   40   II: 5697182-5697221 Caenorhabditis elegans
Exon51184   132   II: 5697266-5697397 Caenorhabditis elegans
Exon51186   111   II: 5697450-5697560 Caenorhabditis elegans
Exon51188   117   II: 5697606-5697722 Caenorhabditis elegans
Exon51189   81   II: 5698861-5698941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25H3.10b.1 5696618 5698941 -1

1 Sequence

Length
947

1 Sequence Ontology Term

Identifier Name Description
transcript