WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25H3.1.1 Sequence Name  C25H3.1.1
Length (nt)  2225   Chromosome Location  II: 5699071-5701435
Chromosome . Primary Identifier  II Chromosome Location . Start  5699071
Chromosome Location . End  5701435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25H3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016111 C25H3.1 C25H3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25H3.1 C25H3.1 636   II: 5700170-5700340

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25H3.1.1 5699071 5701435 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51191   1270   II: 5699071-5700340 Caenorhabditis elegans
Exon51194   73   II: 5700389-5700461 Caenorhabditis elegans
Exon51196   654   II: 5700509-5701162 Caenorhabditis elegans
Exon51199   228   II: 5701208-5701435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25H3.1.1 5699071 5701435 1

1 Sequence

Length
2225

1 Sequence Ontology Term

Identifier Name Description
transcript