WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18A3.4a Sequence Name  C18A3.4a
Length (nt)  1029   Chromosome Location  II: 5710124-5710232
Chromosome . Primary Identifier  II Chromosome Location . Start  5710124
Chromosome Location . End  5710232
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18A3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01796 OSTA-2, isoform a 38.8 342 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001413
WBRNAi00040883
WBRNAi00010960
WBRNAi00029046
WBRNAi00001378

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18A3.4a 5710124 5710232 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015942 osta-2 C18A3.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18A3.4a 5710124 5710232 1
CDS:C18A3.4a 5710398 5710552 1
CDS:C18A3.4a 5710603 5710841 1
CDS:C18A3.4a 5710891 5711001 1
CDS:C18A3.4a 5711277 5711367 1
CDS:C18A3.4a 5711416 5711569 1
CDS:C18A3.4a 5711935 5712104 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18A3.4a.1 C18A3.4a.1 1439   II: 5707691-5712347
Transcript:C18A3.4a.2 C18A3.4a.2 1346   II: 5710052-5712349