WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10C1.5.1 Sequence Name  F10C1.5.1
Length (nt)  1032   Chromosome Location  II: 5772054-5774220
Chromosome . Primary Identifier  II Chromosome Location . Start  5772054
Chromosome Location . End  5774220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10C1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017326 dmd-5 F10C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10C1.5 F10C1.5 843   II: 5772191-5772414

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10C1.5.1 5772054 5774220 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51378   361   II: 5772054-5772414 Caenorhabditis elegans
Exon51379   222   II: 5772463-5772684 Caenorhabditis elegans
Exon51382   93   II: 5773099-5773191 Caenorhabditis elegans
Exon51384   165   II: 5773503-5773667 Caenorhabditis elegans
Exon51385   191   II: 5774030-5774220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10C1.5.1 5772054 5774220 -1

1 Sequence

Length
1032

1 Sequence Ontology Term

Identifier Name Description
transcript