WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05F1.13.1 Sequence Name  K05F1.13.1
Length (nt)  682   Chromosome Location  II: 5789115-5790174
Chromosome . Primary Identifier  II Chromosome Location . Start  5789115
Chromosome Location . End  5790174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05F1.13.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00270309 K05F1.13 K05F1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05F1.13 K05F1.13 579   II: 5789172-5789257

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05F1.13.1 5789115 5790174 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51447   143   II: 5789115-5789257 Caenorhabditis elegans
Exon51448   178   II: 5789466-5789643 Caenorhabditis elegans
Exon51449   60   II: 5789723-5789782 Caenorhabditis elegans
Exon51450   66   II: 5789828-5789893 Caenorhabditis elegans
Exon51451   235   II: 5789940-5790174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05F1.13.1 5789115 5790174 1

1 Sequence

Length
682

1 Sequence Ontology Term

Identifier Name Description
transcript