WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05F1.3.1 Sequence Name  K05F1.3.1
Length (nt)  1352   Chromosome Location  II: 5794495-5796185
Chromosome . Primary Identifier  II Chromosome Location . Start  5794495
Chromosome Location . End  5796185 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05F1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019406 acdh-8 K05F1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05F1.3 K05F1.3 1239   II: 5794555-5794624

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05F1.3.1 5794495 5796185 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51461   130   II: 5794495-5794624 Caenorhabditis elegans
Exon51462   827   II: 5794822-5795648 Caenorhabditis elegans
Exon51463   177   II: 5795693-5795869 Caenorhabditis elegans
Exon51464   218   II: 5795968-5796185 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05F1.3.1 5794495 5796185 1

1 Sequence

Length
1352

1 Sequence Ontology Term

Identifier Name Description
transcript