WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1248.14.1 Sequence Name  ZK1248.14.1
Length (nt)  2540   Chromosome Location  II: 5833328-5836203
Chromosome . Primary Identifier  II Chromosome Location . Start  5833328
Chromosome Location . End  5836203 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1248.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001509 fzo-1 ZK1248.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1248.14 ZK1248.14 2325   II: 5833540-5833621

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.14.1 5833328 5836203 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51550   294   II: 5833328-5833621 Caenorhabditis elegans
Exon51551   135   II: 5833670-5833804 Caenorhabditis elegans
Exon51552   471   II: 5833851-5834321 Caenorhabditis elegans
Exon51553   112   II: 5834367-5834478 Caenorhabditis elegans
Exon51554   1108   II: 5834528-5835635 Caenorhabditis elegans
Exon51555   218   II: 5835687-5835904 Caenorhabditis elegans
Exon51556   126   II: 5835956-5836081 Caenorhabditis elegans
Exon51557   76   II: 5836128-5836203 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.14.1 5833328 5836203 -1

1 Sequence

Length
2540

1 Sequence Ontology Term

Identifier Name Description
transcript