WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1248.15.1 Sequence Name  ZK1248.15.1
Length (nt)  1533   Chromosome Location  II: 5836781-5838553
Chromosome . Primary Identifier  II Chromosome Location . Start  5836781
Chromosome Location . End  5838553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1248.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022883 ZK1248.15 ZK1248.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1248.15 ZK1248.15 1416   II: 5836888-5837121

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.15.1 5836781 5838553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51558   341   II: 5836781-5837121 Caenorhabditis elegans
Exon51559   398   II: 5837165-5837562 Caenorhabditis elegans
Exon51560   249   II: 5837612-5837860 Caenorhabditis elegans
Exon51561   148   II: 5837909-5838056 Caenorhabditis elegans
Exon51562   138   II: 5838108-5838245 Caenorhabditis elegans
Exon51563   259   II: 5838295-5838553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1248.15.1 5836781 5838553 -1

1 Sequence

Length
1533

1 Sequence Ontology Term

Identifier Name Description
transcript