WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H41C03.3.4 Sequence Name  H41C03.3.4
Length (nt)  1781   Chromosome Location  II: 5845788-5850306
Chromosome . Primary Identifier  II Chromosome Location . Start  5845788
Chromosome Location . End  5850306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H41C03.3.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019270 H41C03.3 H41C03.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H41C03.3 H41C03.3 1521   II: 5847746-5847887

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.4 5845788 5850306 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51587   94   II: 5845788-5845881 Caenorhabditis elegans
Exon51588   75   II: 5846633-5846707 Caenorhabditis elegans
Exon51592   142   II: 5847746-5847887 Caenorhabditis elegans
Exon51597   140   II: 5847936-5848075 Caenorhabditis elegans
Exon51601   69   II: 5848393-5848461 Caenorhabditis elegans
Exon51605   307   II: 5848514-5848820 Caenorhabditis elegans
Exon51609   261   II: 5849121-5849381 Caenorhabditis elegans
Exon51613   143   II: 5849427-5849569 Caenorhabditis elegans
Exon51617   119   II: 5849619-5849737 Caenorhabditis elegans
Exon51621   127   II: 5849788-5849914 Caenorhabditis elegans
Exon51625   120   II: 5849958-5850077 Caenorhabditis elegans
Exon51627   184   II: 5850123-5850306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H41C03.3.4 5845788 5850306 1

1 Sequence

Length
1781

1 Sequence Ontology Term

Identifier Name Description
transcript