WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C12.4.1 Sequence Name  F55C12.4.1
Length (nt)  894   Chromosome Location  II: 5857080-5858422
Chromosome . Primary Identifier  II Chromosome Location . Start  5857080
Chromosome Location . End  5858422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018871 F55C12.4 F55C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C12.4 F55C12.4 663   II: 5857270-5857470

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C12.4.1 5857080 5858422 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51642   391   II: 5857080-5857470 Caenorhabditis elegans
Exon51643   206   II: 5857792-5857997 Caenorhabditis elegans
Exon51644   149   II: 5858052-5858200 Caenorhabditis elegans
Exon51645   148   II: 5858275-5858422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C12.4.1 5857080 5858422 -1

1 Sequence

Length
894

1 Sequence Ontology Term

Identifier Name Description
transcript