WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C12.19.1 Sequence Name  F55C12.19.1
Length (nt)  393   Chromosome Location  II: 5866139-5867041
Chromosome . Primary Identifier  II Chromosome Location . Start  5866139
Chromosome Location . End  5867041 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C12.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00271817 F55C12.19 F55C12.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C12.19 F55C12.19 372   II: 5866145-5866226

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C12.19.1 5866139 5867041 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51666   88   II: 5866139-5866226 Caenorhabditis elegans
Exon51667   79   II: 5866313-5866391 Caenorhabditis elegans
Exon51669   73   II: 5866770-5866842 Caenorhabditis elegans
Exon51671   153   II: 5866889-5867041 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C12.19.1 5866139 5867041 1

1 Sequence

Length
393

1 Sequence Ontology Term

Identifier Name Description
transcript