WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C12.5b.1 Sequence Name  F55C12.5b.1
Length (nt)  3250   Chromosome Location  II: 5867252-5873614
Chromosome . Primary Identifier  II Chromosome Location . Start  5867252
Chromosome Location . End  5873614 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018872 tex-2 F55C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C12.5b F55C12.5b 2778   II: 5867673-5867880

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55C12.5b.1 5867252 5873614 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51672   629   II: 5867252-5867880 Caenorhabditis elegans
Exon51673   107   II: 5868022-5868128 Caenorhabditis elegans
Exon51674   312   II: 5868178-5868489 Caenorhabditis elegans
Exon51675   456   II: 5868541-5868996 Caenorhabditis elegans
Exon51676   163   II: 5869041-5869203 Caenorhabditis elegans
Exon51677   722   II: 5869252-5869973 Caenorhabditis elegans
Exon51678   522   II: 5870021-5870542 Caenorhabditis elegans
Exon51679   123   II: 5870588-5870710 Caenorhabditis elegans
Exon51680   143   II: 5873340-5873482 Caenorhabditis elegans
Exon51681   73   II: 5873542-5873614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55C12.5b.1 5867252 5873614 -1

1 Sequence

Length
3250

1 Sequence Ontology Term

Identifier Name Description
transcript