WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59G1.4a.1 Sequence Name  F59G1.4a.1
Length (nt)  1870   Chromosome Location  II: 5896170-5904594
Chromosome . Primary Identifier  II Chromosome Location . Start  5896170
Chromosome Location . End  5904594 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59G1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019128 F59G1.4 F59G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59G1.4a F59G1.4a 1743   II: 5896174-5896240

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59G1.4a.1 5896170 5904594 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51731   71   II: 5896170-5896240 Caenorhabditis elegans
Exon51732   73   II: 5896289-5896361 Caenorhabditis elegans
Exon51733   109   II: 5896409-5896517 Caenorhabditis elegans
Exon51734   93   II: 5897227-5897319 Caenorhabditis elegans
Exon51735   109   II: 5897365-5897473 Caenorhabditis elegans
Exon51736   109   II: 5897516-5897624 Caenorhabditis elegans
Exon51737   127   II: 5897674-5897800 Caenorhabditis elegans
Exon51738   84   II: 5897862-5897945 Caenorhabditis elegans
Exon51739   175   II: 5898328-5898502 Caenorhabditis elegans
Exon51746   53   II: 5902441-5902493 Caenorhabditis elegans
Exon51748   535   II: 5903094-5903628 Caenorhabditis elegans
Exon51750   124   II: 5903925-5904048 Caenorhabditis elegans
Exon51753   208   II: 5904387-5904594 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59G1.4a.1 5896170 5904594 1

1 Sequence

Length
1870

1 Sequence Ontology Term

Identifier Name Description
transcript