WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59G1.5 Sequence Name  F59G1.5
Length (nt)  2007   Chromosome Location  II: 5918712-5918731
Chromosome . Primary Identifier  II Chromosome Location . Start  5918712
Chromosome Location . End  5918731
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59G1.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02705 PTP-2 76.7 668 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00049236
WBRNAi00008093
WBRNAi00109234
WBRNAi00116155
WBRNAi00086150
WBRNAi00016145
WBRNAi00025781
WBRNAi00109622
WBRNAi00033227
WBRNAi00086158
WBRNAi00086157
WBRNAi00086159
WBRNAi00027384
WBRNAi00086156
WBRNAi00111811
WBRNAi00086152
WBRNAi00086151
WBRNAi00086153
WBRNAi00109331
WBRNAi00086093
WBRNAi00091431
WBRNAi00086154
WBRNAi00086155
WBRNAi00086160
WBRNAi00086162
WBRNAi00086161
WBRNAi00109525
WBRNAi00109428

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F59G1.5 5918712 5918731 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004214 ptp-2 F59G1.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F59G1.5 5918712 5918731 1
CDS:F59G1.5 5918778 5918906 1
CDS:F59G1.5 5918961 5919501 1
CDS:F59G1.5 5919545 5919661 1
CDS:F59G1.5 5919719 5920669 1
CDS:F59G1.5 5920720 5920968 1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59G1.5.1 F59G1.5.1 2721   II: 5918647-5921617