WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B12.1a.1 Sequence Name  F28B12.1a.1
Length (nt)  639   Chromosome Location  II: 5942947-5943953
Chromosome . Primary Identifier  II Chromosome Location . Start  5942947
Chromosome Location . End  5943953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017894 F28B12.1 F28B12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B12.1a F28B12.1a 474   II: 5942947-5943042

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B12.1a.1 5942947 5943953 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon51960   96   II: 5942947-5943042 Caenorhabditis elegans
Exon51963   372   II: 5943259-5943630 Caenorhabditis elegans
Exon51969   171   II: 5943783-5943953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B12.1a.1 5942947 5943953 1

1 Sequence

Length
639

1 Sequence Ontology Term

Identifier Name Description
transcript