WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12C12.1a.1 Sequence Name  R12C12.1a.1
Length (nt)  3040   Chromosome Location  II: 6050420-6054307
Chromosome . Primary Identifier  II Chromosome Location . Start  6050420
Chromosome Location . End  6054307 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12C12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020022 gldc-1 R12C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12C12.1a R12C12.1a 2940   II: 6050440-6050595

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12C12.1a.1 6050420 6054307 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52117   176   II: 6050420-6050595 Caenorhabditis elegans
Exon52118   291   II: 6050991-6051281 Caenorhabditis elegans
Exon52120   527   II: 6051329-6051855 Caenorhabditis elegans
Exon52122   203   II: 6051925-6052127 Caenorhabditis elegans
Exon52124   233   II: 6052174-6052406 Caenorhabditis elegans
Exon52126   228   II: 6052460-6052687 Caenorhabditis elegans
Exon52128   219   II: 6052735-6052953 Caenorhabditis elegans
Exon52130   389   II: 6053001-6053389 Caenorhabditis elegans
Exon52132   233   II: 6053433-6053665 Caenorhabditis elegans
Exon52134   168   II: 6053712-6053879 Caenorhabditis elegans
Exon52137   373   II: 6053935-6054307 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12C12.1a.1 6050420 6054307 1

1 Sequence

Length
3040

1 Sequence Ontology Term

Identifier Name Description
transcript