WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R12C12.1b.1 Sequence Name  R12C12.1b.1
Length (nt)  2748   Chromosome Location  II: 6051027-6054227
Chromosome . Primary Identifier  II Chromosome Location . Start  6051027
Chromosome Location . End  6054227 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12C12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020022 gldc-1 R12C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12C12.1b R12C12.1b 2748   II: 6051027-6051281

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R12C12.1b.1 6051027 6054227 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52119   255   II: 6051027-6051281 Caenorhabditis elegans
Exon52121   527   II: 6051329-6051855 Caenorhabditis elegans
Exon52123   203   II: 6051925-6052127 Caenorhabditis elegans
Exon52125   233   II: 6052174-6052406 Caenorhabditis elegans
Exon52127   228   II: 6052460-6052687 Caenorhabditis elegans
Exon52129   219   II: 6052735-6052953 Caenorhabditis elegans
Exon52131   389   II: 6053001-6053389 Caenorhabditis elegans
Exon52133   233   II: 6053433-6053665 Caenorhabditis elegans
Exon52135   168   II: 6053712-6053879 Caenorhabditis elegans
Exon52136   293   II: 6053935-6054227 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R12C12.1b.1 6051027 6054227 1

1 Sequence

Length
2748

1 Sequence Ontology Term

Identifier Name Description
transcript