WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29H12.3a.1 Sequence Name  C29H12.3a.1
Length (nt)  1515   Chromosome Location  II: 6099800-6110126
Chromosome . Primary Identifier  II Chromosome Location . Start  6099800
Chromosome Location . End  6110126 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29H12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004346 rgs-3 C29H12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29H12.3a C29H12.3a 1092   II: 6100065-6100162

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29H12.3a.1 6099800 6110126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52223   217   II: 6099800-6100016 Caenorhabditis elegans
Exon52225   102   II: 6100061-6100162 Caenorhabditis elegans
Exon52228   130   II: 6106057-6106186 Caenorhabditis elegans
Exon52234   136   II: 6108690-6108825 Caenorhabditis elegans
Exon52240   466   II: 6108990-6109455 Caenorhabditis elegans
Exon52251   464   II: 6109663-6110126 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29H12.3a.1 6099800 6110126 1

1 Sequence

Length
1515

1 Sequence Ontology Term

Identifier Name Description
transcript