WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F10.1a.1 Sequence Name  F57F10.1a.1
Length (nt)  3247   Chromosome Location  II: 6147133-6157163
Chromosome . Primary Identifier  II Chromosome Location . Start  6147133
Chromosome Location . End  6157163 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019018 abts-3 F57F10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F10.1a F57F10.1a 2880   II: 6147186-6147738

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57F10.1a.1 6147133 6157163 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52304   606   II: 6147133-6147738 Caenorhabditis elegans
Exon52305   110   II: 6151147-6151256 Caenorhabditis elegans
Exon52312   53   II: 6151614-6151666 Caenorhabditis elegans
Exon52319   89   II: 6152641-6152729 Caenorhabditis elegans
Exon52325   91   II: 6153098-6153188 Caenorhabditis elegans
Exon52331   124   II: 6153524-6153647 Caenorhabditis elegans
Exon52337   207   II: 6153789-6153995 Caenorhabditis elegans
Exon52343   211   II: 6154041-6154251 Caenorhabditis elegans
Exon52349   114   II: 6154296-6154409 Caenorhabditis elegans
Exon52355   207   II: 6154458-6154664 Caenorhabditis elegans
Exon52361   345   II: 6154935-6155279 Caenorhabditis elegans
Exon52367   169   II: 6155380-6155548 Caenorhabditis elegans
Exon52373   174   II: 6155597-6155770 Caenorhabditis elegans
Exon52379   199   II: 6155823-6156021 Caenorhabditis elegans
Exon52385   170   II: 6156569-6156738 Caenorhabditis elegans
Exon52393   378   II: 6156786-6157163 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57F10.1a.1 6147133 6157163 1

1 Sequence

Length
3247

1 Sequence Ontology Term

Identifier Name Description
transcript