WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H35N03.1.1 Sequence Name  H35N03.1.1
Length (nt)  1780   Chromosome Location  II: 6157144-6161094
Chromosome . Primary Identifier  II Chromosome Location . Start  6157144
Chromosome Location . End  6161094 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H35N03.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001373 exp-1 H35N03.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H35N03.1 H35N03.1 1620   II: 6157232-6157360

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H35N03.1.1 6157144 6161094 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52404   217   II: 6157144-6157360 Caenorhabditis elegans
Exon52405   74   II: 6157407-6157480 Caenorhabditis elegans
Exon52406   105   II: 6157919-6158023 Caenorhabditis elegans
Exon52407   101   II: 6158068-6158168 Caenorhabditis elegans
Exon52408   179   II: 6158217-6158395 Caenorhabditis elegans
Exon52409   140   II: 6158439-6158578 Caenorhabditis elegans
Exon52410   138   II: 6158721-6158858 Caenorhabditis elegans
Exon52411   60   II: 6158950-6159009 Caenorhabditis elegans
Exon52412   140   II: 6159064-6159203 Caenorhabditis elegans
Exon52413   122   II: 6159278-6159399 Caenorhabditis elegans
Exon52414   65   II: 6159511-6159575 Caenorhabditis elegans
Exon52415   77   II: 6159623-6159699 Caenorhabditis elegans
Exon52416   18   II: 6159839-6159856 Caenorhabditis elegans
Exon52417   86   II: 6159933-6160018 Caenorhabditis elegans
Exon52418   99   II: 6160112-6160210 Caenorhabditis elegans
Exon52419   159   II: 6160936-6161094 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H35N03.1.1 6157144 6161094 -1

1 Sequence

Length
1780

1 Sequence Ontology Term

Identifier Name Description
transcript