WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30B5.5.1 Sequence Name  C30B5.5.1
Length (nt)  1587   Chromosome Location  II: 6203182-6208216
Chromosome . Primary Identifier  II Chromosome Location . Start  6203182
Chromosome Location . End  6208216 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30B5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016246 daf-37 C30B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30B5.5 C30B5.5 1449   II: 6203292-6203407

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30B5.5.1 6203182 6208216 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon52499   226   II: 6203182-6203407 Caenorhabditis elegans
Exon52500   269   II: 6204151-6204419 Caenorhabditis elegans
Exon52501   255   II: 6204701-6204955 Caenorhabditis elegans
Exon52504   54   II: 6205446-6205499 Caenorhabditis elegans
Exon52505   128   II: 6205947-6206074 Caenorhabditis elegans
Exon52506   93   II: 6206259-6206351 Caenorhabditis elegans
Exon52507   77   II: 6206402-6206478 Caenorhabditis elegans
Exon52508   122   II: 6206527-6206648 Caenorhabditis elegans
Exon52509   156   II: 6207603-6207758 Caenorhabditis elegans
Exon52510   207   II: 6208010-6208216 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30B5.5.1 6203182 6208216 -1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript